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Chalfoun J, Kociolek M, Dima A, Halter M, Cardone A, Peskin A, Bajcsy P, Brady M.  2013.  Segmenting time-lapse phase contrast images of adjacent NIH 3T3 cells.. Journal of microscopy. 249(1):41-52.
Dupont CL, Rusch DB, Yooseph S, Lombardo M-J, R Richter A, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH et al..  2012.  Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.. ISME J. 6(6):1186-99.
Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY.  2011.  A computational statistics approach for estimating the spatial range of morphogen gradients. Development. 138(22):4867-4874.
Kingsford C, Zaslavsky E, Singh M.  2011.  A cost-aggregating integer linear program for motif finding. Journal of Discrete Algorithms. 9(4):326-334.
Ghodsi M, Pop M.  2009.  Inexact Local Alignment Search over Suffix Arrays. IEEE International Conference on Bioinformatics and Biomedicine, 2009. BIBM '09. :83-87.
Bowler C, Karl DM, Colwell RR.  2009.  Microbial oceanography in a sea of opportunity. Nature. 459(7244):180-184.
Wang TD, Plaisant C, Shneiderman B, Spring N, Roseman D, Marchand G, Mukherjee V, Smith M.  2009.  Temporal Summaries: Supporting Temporal Categorical Searching, Aggregation and Comparison. IEEE Transactions on Visualization and Computer Graphics. 15(6):1049-1056.
Giancarlo R, Hannenhalli S.  2008.  Guest Editors' Introduction to the Special Section on Algorithms in Bioinformatics. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 5(4):482-483.